Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920546.1_cds_XP_016469650.1_62180
CDS Infomation

[gene=LOC107791993] [db_xref=GeneID:107791993] [protein=putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial] [protein_id=XP_016469650.1] [location=complement(join(49760..49869,53634..53817,54362..54475,55004..55469,55709..55989))] [gbkey=CDS]
Sequence

ATGGCCAAACGAGGCCTTGAAGTGAAATTCAAGGAATACGATACTCTGTTAAACCAATGT
ATAAACCAAAGGGCTATAAGAGAAGGCCAAAGGGTACATACCCACATGATCAAAACCCAT
TATCAACCTCCAGTCTACCTCAGANTGTACCTCAGGACAAGGCTGATCGTTTTCTACATA
AAATGTGAGCTTTTAGATGATGCTAGGTGGGTGTTTGATGAAATGCCTGAGAGAAATGTT
GTTTCTTGGACTGCTCTTATTTCTGGGTATTCTCAGAAAGGCCACGGAGGAATGGAGGAT
AAAGGTGTACAGATTTTCAATGAAATAAGTATTGGCAAAGACAGGGTCGAGGTTAACATT
GAGCACTATGGTTGTGTGGTTGATTTGCTAAGTCGAGCTGGCCAAGTAGAAAGGGCCTTT
CAATTCATCAGAGAGATGCCTTTTCCACCAACTGCTGCAATTCTGGGTTCACTTTTAGGT
GCTTGCTGGGCTCACCTGTGTGTTGATATTGGTGAAATTGTAGCCAAACAACTTTTAAAG
ATAGAGCCAGAAAATTCTGGAACTTATGTGATCCTTTCGAACTTGTATGCATCGGCAGGA
AGGTGGGAAGATGCAAGAAGTGTAAGAGAGATGATAAACGAACGGGCCATTGTAAAGGAA
TCCGGAAAAAGCTGGATTGGTCCTGATCTTATCCATGAAACAGAGAAGGTTATAGCAAAA
TGTAGTGGAATTAGCAGTAAGGATCAGATTTTTGCCTATTACAGCTGCACTGTTCTCGAC
TCTCACAGTCTCATTCTCTCTCTGCTCTCTGGTTTCTCCATCCCTCTTTGCCTTTGGTCT
CGCCATCTCGCTGTCTTGCCGATAAGTATGGAGTCTCAAGATGAAGAAAATTCAATGGTT
TCATCTTCTAGTACTTTTCCCATTGAAGATGAGAGCCAAAGACCGACTCAAGCTAACAAA
GTTATTGGAACTAAAAATAAGAAATTGACTTTTAAAGCACAACATTTTAGATTGCTGATG
ATCAATGGTGTTTTCTTTGGTGATTGCCTGCCACAAAGAGTTGTTGTCTCCCGTACTGCT
TTAATCTCAGGCTATGCTCAACAGCGATTAGATGAAGATGCACTAGAGCTTTTCCGCCAG
TTACATGCAGAGTGA

Peptide Sequence

PEP ID

XP_016469650.1
PEP Infomation

PREDICTED: putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial [Nicotiana tabacum]
Sequence

MAKRGLEVKFKEYDTLLNQCINQRAIREGQRVHTHMIKTHYQPPVYLRXYLRTRLIVFYI
KCELLDDARWVFDEMPERNVVSWTALISGYSQKGHGGMEDKGVQIFNEISIGKDRVEVNI
EHYGCVVDLLSRAGQVERAFQFIREMPFPPTAAILGSLLGACWAHLCVDIGEIVAKQLLK
IEPENSGTYVILSNLYASAGRWEDARSVREMINERAIVKESGKSWIGPDLIHETEKVIAK
CSGISSKDQIFAYYSCTVLDSHSLILSLLSGFSIPLCLWSRHLAVLPISMESQDEENSMV
SSSSTFPIEDESQRPTQANKVIGTKNKKLTFKAQHFRLLMINGVFFGDCLPQRVVVSRTA
LISGYAQQRLDEDALELFRQLHAE

Transcript Sequence

Gene sequence data has not been registered.